Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837707.1_cds_XP_016506711.1_19911
CDS Infomation

[gene=LOC107824465] [db_xref=GeneID:107824465] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016506711.1] [location=join(33961..34149,35352..35516,35591..35747,36805..36890,36989..37188,37615..37663,37907..38116,40408..40614,41369..41551)] [gbkey=CDS]
Sequence

ATGATTTCGTACGCTGCCGGAATATTCTTCCTCGTAGGATTCTCCATCGCCGCCGCCGCC
GACGGACGTAATGTTTTGAAACTTCCGTCGGAAGCTTCCAGATTCTTCGATGAAGCCGAT
GACTCTGTTGGAACCAGATGGGCCGTCCTTCTTGCCGGATCAAATGGTTATTGGAATTAT
AGACATCAGGCTGATGTATGCCACGCGTATCAGCTGTTGAGAAAAGGTGGTCTCAAAGAT
GAGAATATTATCATGTTCATGTATGATGACATTGCTTATAATGAAGAGAACCCAAGACAA
GGAGTTATCATCAATAGTCCTGCTGGCGAGGATGTCTACAAAGGAGTCCCTAAGGATTAT
ACTGGAGATGATGTTAATGTGGACAACTTTTTGGCCGTTCTCCTTGGTAACAAAACTGCT
CTTACTGGAGGTAGTGGAAAGGTGGTGGATAGTGGTCCAAATGATCATATTTTCATATTC
TATAGTGATCATGGTGGCCCTGGGGTGCTTGGGATGCCTACCAATCCTTATCTCTATGCA
AGTGATCTGATTGATGTGTTGAAAAAGAAGCATGCCTCTGGAACATATAAAAGCTTGGTA
CTGTACATTGAAGCTTGTGAGTCCGGAAGTATCTTTGAGGGTCTTCTTCCTAAAGGTCTA
AATATTTATGCCACAACAGCATCAAACGCTGTAGAGAGCAGCTGGGGCACCTATTGTCCT
GGAGACTATCCTAGTCTTCCTCCTGGCTATGAGACCTGCCTGGGTGACTTGTATGCTGTT
TCCTGGATGGAGGACAGTGAAATGCACAATTTGCGGACTGAAAATTTGAGGCAACAGTAT
CACCTGGTCAAAGAGAGAACTGCTAATGGAAATTCTGCTTATGGTTCCCATGTCTTGCAA
TTTGGTGATCTACAACTGGGTATGGATTCTCTGTTCATGTACATGGGTACAAATCCTGCA
AATGATAACTACACCTATGTAGATGATAATTCCTTGCGGGCATCATCAAAGGCTGTCAAC
CAGCGTGATGCAGATCTTTTGCATTTCTGGGACAAGTTCCGCAAGGCTCCTGAAGGCTCT
GCTCGGAAAGTTGAAGCTCAGAAGCAATTCACTGAAGCTATGTCACACAGAATGCACCTA
GACAACAGCATGGCTCTTGTTGGTAAGCTTCTGTTTGGAATTCAAAAAGGTCCTGAGGTG
CTGAAGCGTGTTCGACCTGTAGGTCAACCTCTTGTTGATGACTGGACCTGCCTGAAGTAC
TTTGTAAGAACATTTGAGACACACTGTGGATCATTATCCCAATATGGAATGAAACACATG
CGATCCATCGCCAATATCTGTAATGCTGGAATTAAGATGGAGCAGATGGTGGAGGCATCA
ACACAAGCTTGTCCCAGCGTCCCGACCAATATTTGGAGTTCCCTCCACAGGGGTTTTAGT
GCATAA

Peptide Sequence

PEP ID

XP_016506711.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MISYAAGIFFLVGFSIAAAADGRNVLKLPSEASRFFDEADDSVGTRWAVLLAGSNGYWNY
RHQADVCHAYQLLRKGGLKDENIIMFMYDDIAYNEENPRQGVIINSPAGEDVYKGVPKDY
TGDDVNVDNFLAVLLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNPYLYA
SDLIDVLKKKHASGTYKSLVLYIEACESGSIFEGLLPKGLNIYATTASNAVESSWGTYCP
GDYPSLPPGYETCLGDLYAVSWMEDSEMHNLRTENLRQQYHLVKERTANGNSAYGSHVLQ
FGDLQLGMDSLFMYMGTNPANDNYTYVDDNSLRASSKAVNQRDADLLHFWDKFRKAPEGS
ARKVEAQKQFTEAMSHRMHLDNSMALVGKLLFGIQKGPEVLKRVRPVGQPLVDDWTCLKY
FVRTFETHCGSLSQYGMKHMRSIANICNAGIKMEQMVEASTQACPSVPTNIWSSLHRGFS
A

Transcript Sequence

Gene sequence data has not been registered.